Equipment
Mass spectrometers
- Applied Biosystems Voyager-DE PRO MALDI-TOF for accurate molecular weight determination and peptide mass fingerprinting
- Applied Biosystems 4000 QTRAP equipped with Turbo V and NanoSpray electronspray ion sources a high performance hybrid triple quadrupole/linear ion trap LC/MS/MS mass spectrometer suitable for protein identification, post-translational modification detection and protein quantitation
HPLC
- Proxeon Easy nLC II (Bruker) nano LC for sample fractionation
- Agilent 1100 nano LC for chromatographic separations
Luminex-based multiplex analysis
- Bioplex system (BioRad)
Equipments for electrophoresis
- BioRad IEF cell suitable for 7 cm, 11 cm, 17 cm and 24 cm strip analysis
- BioRad Mini-PROTEAN Tetra Cell
- BioRad PROTEAN II xi XL Cells
- BioRad PROTEAN Plus Multi-Casting Chamber
- BioRad PROTEAN Plus Dodeca Cell
- BioRad PharosFX Plus System for gel documentation
Softwares
- ProteinPilot 4.5 (ABSciex) for protein identification and quantifiction
- Delta2D (Decodon) for accurate 2DE gel image analysis
- PDQuest (BioRad) for 2DE gel image analysis
- QuantityOne (BioRad) for 1D gel image analysis
- MRMPilot (ABSciex) for SRM transition design
- MultiQuant (ABSciex) for SRM data analyisis
- Skyline (MacCoss Lab) for SRM transition design, optimization, data analysis and data publication (Panorama)
Ultracentrifuge
- Kontron ultracentrifuge
- Sorvall WX Ultra (Thermo Scientific) ultracentrifuge
- List of available rotors:
