Public Oligonucleotide Database of LRB
| Transcript (Accesion No.) | Primers/probe sequences |
| Kv11.1 (U87513) |
forward: 5'-GCTCATTGGCTCCCTCATG-3' reverse: 5'-CCGAGTACAGCCGCTGGAT-3' probe: 5'-FAM-TTCGGCAACGTGTCCGCCAT-TAMRA-3' |
| Kv7.1 (AJ291316) |
forward: 5'-AGGAGCTGATCACCA-3' reverse: 5'-GTAGGAGGAGAAGATG-3' probe: 5'-FAM-AGGCCGAGGAAGCCGATGTA-TAMRA-3' |
| Kv4.2 (AF493547) |
forward: 5'-CAGATCAGATGTGTGGAGAGAACA-3' reverse: 5'-CACAGTTTAGTTTAACACACTCTTCCAT-3' probe: 5'-FAM-TGTCTAACAGCCGATCCAGTTTAAATGCCA-TAMRA-3' |
| Kv4.3 (AF085170) |
forward: 5'-ATTGATGAGCAGATG-3' reverse: 5'-GTAGTTCTGCATTGA-3' probe: 5'-FAM-TCTCCATGCAGTTCTGCT-TAMRA-3' |
| 18S rRNA (EF060919) |
forward: 5'-GAGGGAGCCTGAGAAACGG-3' reverse: 5'-GTCGGGAGTGGGTAATTTGC-3' probe: 5'-FAM-TACCACATCCAAGGAAGGCAGCAGG-TAMRA-3' |
| HIV-1 PR D25K |
forward: 5'-GAAGCTCTGCTGAAGACTGGCGCTGACGATACC-3' reverse: 5'-GGTATCGTCAGCGCCAGTCTTCAGCAGAGCTTC-3' |
| HIV-1 PR D25R |
forward: 5'-GAAGCTCTGCTGCGTACTGGCGCTGACGATACC-3' reverse: 5'-GGTATCGTCAGCGCCAGTACGCAGCAGAGCTTC-3' |
| HIV-1 PR D25W |
forward: 5'-GAAGCTCTGCTGTGGACTGGCGCTGACGATACCG-3' reverse: 5'-CGGTATCGTCAGCGCCAGTCCACAGCAGAGCTTC-3' |
| HIV-1 PR G49E |
forward: 5'-CCAAAAATGATAGGGGAAATTGGAGGTTTTATCAAAG-3' reverse: 5'-CTTTGATAAAACCTCCAATTTCCCCTATCATTTTTGG-3' |
| HIV-1 PR G49W/I50W |
forward: 5'-CCAAAAATGATAGGGTGGTGGGGAGGTTTTATCAAAG-3' reverse: 5'-CTTTGATAAAACCTCCCCACCACCCTATCATTTTTGG-3' |
| HIV-1 PR D25R/G49E/I50R |
forward: 5'-CCAAAAATGATAGGGGAAAGAGGAGGTTTTATCAAAGTAAGAC-3' reverse: 5'-GTCTTACTTTGATAAAACCTCCTCTTTCCCCTATCATTTTTGG-3' |
| CMV promoter |
forward: 5'-GCGGGATCCGGAGTTCCGCGTTACATAAC-3' reverse: 5'-CGCACGCGTGCGCTCTGCTTATATAG-3' |
| pMDLg/pRRE D25K |
forward: 5'-GGCAATTAAAGGAAGCTCTATTAAAGACAGGAGCAGATGATACAG-3' reverse: 5'-CTGTATCATCTGCTCCTGTCTTTAATAGAGCTTCCTTTAATTGCC-3' |
| pMDLg/pRRE D25R |
forward: 5'-GGCAATTAAAGGAAGCTCTATTACGTACAGGAGCAGATGATACAG-3' reverse: 5'-CTGTATCATCTGCTCCTGTACGTAATAGAGCTTCCTTTAATTGCC-3' |
| pMDLg/pRRE dN |
A (outer, forward): 5'-GGCCCCTAGGAAAAAGGGCTGTTGGAAATG-3' B (inner, reverse): 5'-GGGTCGCTGCCAAAGAGTGAAGCTAAAGG-3' C (inner, forward): 5'-CCTTTAGCTTCACTCTTTGGCAGCGACCC-3' D (outer, reverse): 5'-GGGCCCTGCAGGATGTGGTATTCCTAATTG-3' |
| pMDLg/pRRE dC |
A (outer, forward): 5'-GGCCCCTAGGAAAAAGGGCTGTTGGAAATG-3' B (inner, reverse): 5'-CAATAGGACTAATGGGAGTGCAGCCAATC-3' C (inner, forward): 5'-GATTGGCTGCACTCCCATTAGTCCTATTG-3' D (outer, reverse): 5'-GGGCCCTGCAGGATGTGGTATTCCTAATTG-3' |
| Your comments? | Updated: Oct 2, 2007 |